BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033G10SP1|AL429805
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1675 1528 0.0
>3x_Contig1675
Length = 13954
Score = 1528 bits (769), Expect = 0.0
Identities = 781/787 (99%)
Strand = Plus / Plus
Query: 1 cagtrataatattaacacatcccagcaaacgtttttgccctgttcataactggtaggcaa 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1229 cagtaataatattaacacatcccagcaaacgtttttgccctgttcataactggtaggcaa 1288
Query: 61 gcactaacgcaattgatttttggtgtgcaccctgtctcgttcagctccggtttgaggtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1289 gcactaacgcaattgatttttggtgtgcaccctgtctcgttcagctccggtttgaggtgg 1348
Query: 121 agaactaaaaaatccagctcgcgcaacaacaacaaatctgttttttgtgttgtccgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1349 agaactaaaaaatccagctcgcgcaacaacaacaaatctgttttttgtgttgtccgtttt 1408
Query: 181 tgtgcagtatgcagcaccaaactccatatcgagaaaacatctgataaatggtactatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1409 tgtgcagtatgcagcaccaaactccatatcgagaaaacatctgataaatggtactatatt 1468
Query: 241 tccctttcgtagcaacagcgtagagatttgagacctgcgactttatagttgaacagctta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1469 tccctttcgtagcaacagcgtagagatttgagacctgcgactttatagttgaacagctta 1528
Query: 301 cagcaactgtttgaacttgtggttcctgaacggctctacagggtagtctgtgctcgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1529 cagcaactgtttgaacttgtggttcctgaacggctctacagggtagtctgtgctcgaaga 1588
Query: 361 gaggaaagtagttctttcactcgtttcatcgtcgtctttgtcttgcaaacggtaagctgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1589 gaggaaagtagttctttcactcgtttcatcgtcgtctttgtcttgcaaacggtaagctgc 1648
Query: 421 aggtgtagggtagtccattgaattccctatccgaagttctcacagcttttgggtgctctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 aggtgtagggtagtccattgaattccctatccgaagttctcacagcttttgggtgctctt 1708
Query: 481 aatatatatnatatatnakctcgacagtttctgacgggacaagcctgtaaaactagtgat 540
||||||||| |||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 aatatatataatatataaccccgacagtttctgacgggacaagcctgtaaaactagtgat 1768
Query: 541 ggttggactatctgtttacagctttttcaatagactgtttgtttcatatcaatagctcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 ggttggactatctgtttacagctttttcaatagactgtttgtttcatatcaatagctcag 1828
Query: 601 aatactctcagcttacaagactatcccaaccttaaattgaraagagagatggtttccttt 660
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1829 aatactctcagcttacaagactatcccaaccttaaattgaaaagagagatggtttccttt 1888
Query: 661 aataaattatgctctttagccttaattagcagtgctgctttggtctctgctgccacttac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1889 aataaattatgctctttagccttaattagcagtgctgctttggtctctgctgccacttac 1948
Query: 721 cacattgatgtggattacgaagaatacttggatgtttacttccattacagagaaagtggt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1949 cacattgatgtggattacgaagaatacttggatgtttacttccattacagagaaagtggt 2008
Query: 781 gacgccg 787
|||||||
Sbjct: 2009 gacgccg 2015
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5175
Number of Sequences: 1807
Number of extensions: 5175
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)